Mechanisms of DNA Synthesis

Biochemistry 201

Advanced Molecular Biology

January 19, 2000

Mechanisms of DNA Synthesis Handout

Mechanisms of DNA Synthesis Slides

 

Doug Brutlag

 

Literature References

Review of DNA replication by Arthur Kornberg

Kornberg A, (1988). DNA replication.J Biol Chem 263(1):1-4.

Review of Origin of replication by Bramhill and Kornberg

Bramhill, D. and Kornberg, A. (1988). A model for Initiation at Origins of DNA Replication. Cell 54 , 915-918.

Useful Reference Books

Kornberg, A and Baker, T. (1992) DNA Replication, W. H. Freeman and Company, New York, New York. 931 pp.

J. Julian Blow, Ed. (1996) Eukaryotic DNA Replication. in Frontiers in Molecular Biology Series Eds B. D. Hames and D. M. Glover, IRL Press, Oxford University Press, New York. 232 pps.

DePamphilis, M. (1996) DNA Replication in Eukaryotic Cells, Cold Spring Harbor Laboratory Press, 1058 pps.

DePamphilis, M. (1999) Concepts in Eukaryotic DNA Replication, Cold Spring Harbor Laboratory Press, 1058 pps.

Literature References

(Back to Top)

Alberts, B. M. (1987). Prokaryotic DNA replication mechanisms. Philos-Trans-R-Soc-Lond. [Biol]. 317, 395-420.

Beckman, R. A. and Loeb, L. A. (1993). Multi-stage proofreading in DNA replication. Q Rev Biophys 26 (3), 225-331.

Goodman, M. F., Creighton, S., Bloom, L. B. and Petruska, J. (1993). Biochemical basis of DNA replication fidelity. Crit Rev Biochem Mol Biol 28(2), 83-126.

Hurwitz, J., Dean, F. B., Kwong, A. D. and Lee, S.-H. (1990). The in vitro Replication of DNA Containing the SV40 Origin. J. Biol. Chem., 265(30), 18043-18046.

Kelly, T. J. (1988). SV40 DNA Replication. J. Biol. Chem., 263(34), 17889-17892.

Kornberg, A. (1988). DNA replication. J. Biol. Chem. 263, 1-4.

Kunkel, T. A. (1992). DNA Replication Fidelity. J. Biol. Chem. 267, 18251-18254.

Kuriyan, J. and O'Donnell, M. (1993). Sliding clamps of DNA polymerases. J Mol Biol 234 (4), 915-25.

(Back to Top)

Lehman, I. R. (1974). DNA ligase: Structure, mechanism, and function. Science 186, 790-797.

Lehman, I. R. and Kaguni, L. S. (1989). DNA Polymerase alpha. J. Biol. Chem., 264(8), 4265-4268.

Loeb, L. A. and Kunkel, T. A. (1982). Fidelity of DNA synthesis. Annual Review of Biochemistry 51, 429-57.

McHenry, C. S. (1991). DNA polymerase III holoenzyme. Components, structure, and mechanism of a true replicative complex. J Biol Chem 266 (29), 19127-30.

Morrison, A. and Sugino, A. (1993). DNA polymerase II, the epsilon polymerase of Saccharomyces cerevisiae. Prog Nucleic Acid Res Mol Biol 46 , 93-120.

O'Donnell, M. (1992). Accessory protein function in the DNA polymerase III holoenzyme from E. coli. Bioessays 14 (2), 105-11.

O'Donnell, M. (1994). Beta sliding clamp dynamics within E. coli DNA polymerase III holoenzyme. Ann N Y Acad Sci 726 , 144-53; discussion 153-5.

(Back to Top)

O'Donnell, M., Kuriyan, J., Kong, X. P., Stukenberg, P. T. and Onrust, R. (1992). The sliding clamp of DNA polymerase III holoenzyme encircles DNA. Mol Biol Cell 3 (9), 953-7.

Shinagawa, H., Iwasaki, H., Ishino, Y. and Nakata, A. (1991). SOS-inducible DNA polymerase II of E coli is homologous to replicative DNA polymerase of eukaryotes. Biochimie 73 (4), 433-5.

Sitney, K. C., Budd, M. E. and Campbell, J. L. (1992). Yeast DNA polymerases. Ann N Y Acad Sci 665 , 52-8.

(Back to Top)