|
Date
|
Topic
|
Lecturer
|
Problem Sets
|
|
9/27
|
I. Introduction to Thermodynamics &
Molecular Forces
|
Puglisi
|
|
|
9/29
|
I. Introduction to Thermodynamics &
Molecular Forces
cont.
|
Puglisi
|
#1 out
|
|
10/1
|
II. RNA Structure and Energetics
|
Puglisi
|
|
|
10/4
|
II. RNA Structure and Energetics
cont.'d
|
Puglisi
|
|
|
10/6
|
III. Protein Structure
|
McKay
|
#2a out, #1 due
|
|
10/8
|
III. Protein Structure
cont.
|
McKay
|
#2b out, #2a due
|
|
10/11
|
III. Protein Structure
cont.
|
McKay
|
|
|
10/13
|
III. Protein Structure
cont.
|
McKay
|
|
|
10/15
|
III. Protein Structure
cont.
|
McKay
|
|
|
10/18
|
IV. Protein-Protein Interactions &
Applications
|
Garcia
|
#3 out
|
|
10/20
|
IV. Protein-Protein Interactions &
Applications
cont.
|
Garcia
|
#2b due
|
|
10/22
|
IV. Protein-Protein Interactions &
Applications
cont.
|
Garcia
|
|
|
10/25
|
V. Thermodynamics, Structure, &
Computation
|
Pande
|
|
|
10/27
|
VI. Allostery/Molecular Transducers
|
Block
|
#4 out
|
|
10/29
|
VI. Allostery/Molecular Transducers
cont.
|
Block
|
#3 due
|
|
11/1
|
VII. Rates of Biological Processes
A. Diffusion and Biology
|
Block
|
|
|
11/3
|
VII. Rates of Biological Processes
A. Diffusion and Biology
cont.
|
Block
|
|
|
11/5
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
|
Herschlag
|
|
|
11/8
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
cont.
|
Herschlag
|
|
|
11/10
|
Kinetic Simulation: Introduction and
Examples
|
Herschlag
|
#5a out, #4 due
|
|
11/12
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
cont.
|
Herschlag
|
|
|
11/15
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
cont.
|
Herschlag
|
|
|
11/17
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
cont.
|
Herschlag
|
|
|
11/19
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
cont.
|
Herschlag
|
|
|
11/22
|
VII. Rates of Biological Processes
B. Enzymes: Basic concepts of kinetics, catalysis
& energetics
cont.
|
Herschlag
|
|
|
11/24
|
VIII. Biochemical Approaches
|
Herschlag
|
#5b out
|
|
11/26
|
Thanksgiving Holiday
|
class cancelled.
|
|
|
11/29
|
VIII. Biochemical Approaches
cont.
|
Herschlag
|
#5a due
|
|
12/1
|
VIII. Biochemical Approaches
cont.
|
Ferrell
|
#6 out
|
|
12/3
|
VIII. Biochemical Approaches
cont.
|
Ferrell
|
#5b due
|
|
12/6
|
FINAL PRESENTATIONS
|
|
#6 due
|
