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EGCG PROGRAMS

TABLE OF CONTENTS

Version 8.1-UNIX

Printed: April 22, 1996 15:56

FULL DESCRIPTIONS OF EGCG PROGRAMS

ACKNOWLEDGEMENTS

SHORT DESCRIPTIONS Short Descriptions

EDITING

  • NewFeatures Contents
  • NewFeatures

    FRAGMENT ASSEMBLY

  • GelStatus
  • GelPicture
  • GelFigure * (+)
  • GelAnalyze

    MAPPING

  • MapSelect
  • EFingerPrint *

    COMPARISON

  • EDiverge
  • EOverlap *
  • BigEOverlap *
  • FilterOverlap *

    DATABASE SEARCHING

  • NewFetch *
  • FastACheck
  • TWordSearch (+)
  • TSegments
  • EQuickSearch *
  • QuickMatch * (+)
  • EQuickIndex *
  • StsSearch *
  • RFindPatterns *
  • PatternPlot * (+)

    MULTIPLE SEQUENCE ANALYSIS

  • PrettyPlot * (+)
  • PrettyBox * (+)
  • PlotAlign (+)
  • PepAllWindow (+)
  • EPlotSimilarity (+)
  • PolyDot * (+)
  • TProfileSearch
  • TProfileSegments
  • TProfileGap
  • ProfilePlot * (+)
  • SortConsensus *
  • ELineUp *
  • MultAlign *
  • EClustalW *
  • ClusTree * (+)
  • ProfAlign *

    EVOLUTIONARY ANALYSIS

  • Homologies *
  • ToPhylip *
  • Phylip2Tree * (+)
  • ESeqBoot *
  • EDnaML *
  • EDnaMLK *
  • EDnaDist *
  • EProtDist *
  • EDnaPars *
  • EProtPars *
  • ENeighbor *
  • EFitch *
  • EKitsch *
  • EConsense *

    PATTERN RECOGNITION

  • Palindrome
  • EWindow
  • EStatPlot (+)
  • ECodonFrequency *
  • EConsensus *
  • ECorrespond *
  • ERepeat *
  • ETerminator *

    NUCLEOTIDE ANALYSIS

  • Melt *
  • MeltPlot * (+)
  • BasePairPlot * (+)
  • CpGPlot * (+)
  • CpGReport *
  • Chaos * (+)
  • CodFish *
  • WordCount *
  • WordUp *
  • Poland * (+)
  • GeneTrans *
  • GapFrame *
  • Prima * (+)
  • QuickTandem *
  • Tandem *
  • Inverted *
  • EComposition *

    PROTEIN ANALYSIS

  • PepCoil (+)
  • PepNet * (+)
  • PepWheel * (+)
  • PepWindow * (+)
  • PepStats
  • SigCleave
  • Antigenic
  • HelixTurnHelix
  • DoDayhoffStat *
  • PepCount *
  • EPeptideSort *

    TRANSLATION

  • ETranslate
  • AllTrans
  • EExtractPeptide
  • MyTrans

    MANIPULATION

  • EAssemble
  • ECompTable
  • EReverse
  • PepCorrupt

    DISPLAY< /A>

  • EPublish *
  • ELibGen *
  • RedToHtml *

    SEQUENCE EXCHANGE

  • ToText
  • ToGenBank
  • ToEmbl
  • ToPirAll
  • ToPrimer
  • ToRelate *
  • CReformat *
  • EFromFasta *
  • EFromStaden *
  • EToStaden *
  • EGetSeq *

    FILE UTILITIES

  • NoReturn
  • CppJL
  • CRtoLF
  • AddComment
  • ECrypt *
  • ECodeSearch *
  • ECLSort *

    MISCELLANEOUS

  • Test
  • CTest
  • KeyFind

    DATABASE MAINTENANCE

  • DbStats
  • GbOnly
  • PirOnly
  • CheckLen
  • CheckLenComp
  • KabatToGcg
  • SeqDbToGcg
  • ConvertEnz
  • Ig2Nbrf *
  • EMBLtoGCGSC *

    WHAT'S NEW

  • What's New in Version 8.1 EGCG

    (+) generates graphics which require a graphics output device.

    * new or enhanced in the current EGCG version.